Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35873597 . A C CCDS3911.1:NM_002185.3:c.553Agc>Cgc_NP_002176.2:p.185S>R Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 SER B:186 B:185 63.0 0.548 S -91.9 178.7 54.0 0.47 0.078 C:Q9HC73:0.078
 HOH
 9.346
 HG
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 SER B:169 B:165 61.0 0.53 S -113.8 176.8 61.0 0.53 0.0
SER D:169 D:165 61.0 0.53 S -112.7 176.2 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 SER B:169 B:165 59.0 0.513 S -130.2 178.7 59.0 0.513 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 SER A:169 A:165 67.0 0.583 S -93.9 -179.4 67.0 0.583 0.0 HOH
 3.679
 N
 O
SER B:169 B:165 66.0 0.574 S -103.3 -177.4 66.0 0.574 0.0 SO4
HOH
 2.603
3.439
 OG
CB
 O1
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 SER A:169 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 SER G:169 G:165 64.0 0.557 S -80.7 -158.5 NA NA NA
SER I:169 I:165 59.0 0.513 S -81.0 -158.9 NA NA NA
SER J:169 J:165 62.0 0.539 S -81.1 -157.8 NA NA NA
SER K:169 K:165 63.0 0.548 S -81.3 -158.8 63.0 0.548 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 SER A:185 A:185 64.0 0.557 S -116.2 150.4