Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35873619 . A C CCDS3911.1:NM_002185.3:c.575cAg>cCg_NP_002176.2:p.192Q>P Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 GLN B:193 B:192 44.0 0.244 G -66.4 -36.4 44.0 0.244 0.0
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLN B:176 B:172 32.0 0.178 G -57.8 -32.6 32.0 0.178 0.0 HOH
 9.844
 NE2
 O
GLN D:176 D:172 44.0 NA G -55.2 -31.0 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 GLN B:176 B:172 38.0 0.211 G -32.2 -66.1 38.0 0.211 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 GLN A:176 A:172 16.0 0.089 G -54.7 -40.4 16.0 0.089 0.0 HOH
 2.653
 NE2
 O
GLN B:176 B:172 21.0 0.117 G -51.6 -37.1 21.0 0.117 0.0 HOH
 2.696
 O
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLN A:176 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 GLN G:176 G:172 33.0 0.183 S -64.9 -36.5 NA NA NA
GLN I:176 I:172 43.0 0.239 G -64.6 -36.0 NA NA NA
GLN J:176 J:172 22.0 0.122 S -65.3 -36.6 NA NA NA
GLN K:176 K:172 48.0 0.267 S -64.8 -37.1 48.0 0.267 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 GLN A:192 A:192 33.0 0.183 G -53.8 -43.7