Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35873636 . G A CCDS3911.1:NM_002185.3:c.592Gca>Aca_NP_002176.2:p.198A>T Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 ALA B:199 B:198 42.0 0.365 S 49.6 46.2 42.0 0.365 0.0 HOH
 7.188
 O
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ALA B:182 B:178 22.0 0.191 S 34.1 75.4 22.0 0.191 0.0 HOH
 6.598
 CA
 O
ALA D:182 D:178 62.0 0.539 S 37.6 75.6 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ALA B:182 B:178 55.0 0.478 S 58.6 4.1 55.0 0.478 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 ALA A:182 A:178 40.0 0.348 T 49.8 40.6 40.0 0.348 0.0 HOH
 4.819
 N
 O
ALA B:182 B:178 44.0 0.383 T 53.6 38.6 44.0 0.383 0.0 HOH
 4.625
 N
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 ALA A:182 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 ALA G:182 G:178 63.0 0.548 T 55.5 43.0 NA NA NA
ALA I:182 I:178 44.0 0.383 T 56.2 41.5 NA NA NA
ALA J:182 J:178 63.0 0.548 T 55.0 42.5 NA NA NA
ALA K:182 K:178 69.0 0.6 T 55.3 41.8 69.0 0.6 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 ALA A:198 A:198 51.0 0.443 T 52.0 21.2