Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35873646 . A C CCDS3911.1:NM_002185.3:c.602tAt>tCt_NP_002176.2:p.201Y>S Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 TYR B:202 B:201 13.0 0.057 E -117.2 148.7 13.0 0.057 0.0 HOH
 4.924
 HA
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 TYR B:185 B:181 16.0 0.07 E -110.9 153.3 16.0 0.07 0.0 HOH
 9.119
 N
 O
TYR D:185 D:181 18.0 0.078 E -105.5 150.7 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 TYR B:185 B:181 18.0 0.078 E -115.7 145.4 18.0 0.078 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 TYR A:185 A:181 13.0 0.057 E -111.1 148.5 13.0 0.057 0.0 HOH
 7.272
 O
 O
TYR B:185 B:181 11.0 0.048 E -113.6 147.2 11.0 0.048 0.0 HOH
 5.993
 CE1
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 TYR A:185 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 TYR G:185 G:181 13.0 0.057 E -119.9 136.2 NA NA NA
TYR I:185 I:181 12.0 0.052 E -117.9 137.7 NA NA NA
TYR J:185 J:181 10.0 0.043 E -119.4 135.4 NA NA NA
TYR K:185 K:181 13.0 0.057 E -119.6 135.5 13.0 0.057 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 TYR A:201 A:201 14.0 0.061 E -118.2 135.9