Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35873661 . G A CCDS3911.1:NM_002185.3:c.617cGa>cAa_NP_002176.2:p.206R>Q Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 ARG B:207 B:206 52.0 0.231 E -142.0 171.4 52.0 0.231 0.0 HOH
 3.450
 HH21
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ARG B:190 B:186 54.0 0.24 E -164.1 153.1 54.0 0.24 0.0 HOH
 2.912
 NH1
 O
ARG D:190 D:186 56.0 0.249 -164.3 156.0 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 ARG B:190 B:186 59.0 0.262 E -146.3 162.7 59.0 0.262 0.0 HOH
 3.658
 NH1
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 ARG A:190 A:186 56.0 0.249 E -138.0 170.5 56.0 0.249 0.0 SO4
HOH
 8.759
5.786
 CB
C
 O4
O
ARG B:190 B:186 53.0 0.236 E -144.7 166.4 53.0 0.236 0.0 NGA
HOH
 9.407
3.191
 C
NH1
 C5
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 ARG A:190 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 ARG G:190 G:186 53.0 0.236 E -126.9 168.3 NA NA NA
ARG I:190 I:186 39.0 0.173 E -129.7 169.9 NA NA NA
ARG J:190 J:186 38.0 0.169 E -126.4 170.3 NA NA NA
ARG K:190 K:186 57.0 0.253 E -127.1 170.2 57.0 0.253 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 ARG A:206 A:206 55.0 0.244 E -136.2 169.4