Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35873695 . G A CCDS3911.1:NM_002185.3:c.651tgG>tgA_NP_002176.2:p.217W>* Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 TRP B:218 B:217 77.0 0.302 -66.7 144.5 77.0 0.302 0.0 HOH
 4.041
 HZ2
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 TRP B:201 B:197 79.0 0.31 -67.5 144.6 79.0 0.31 0.0 HOH
 3.818
 CB
 O
TRP D:201 D:197 77.0 0.302 -71.4 142.5 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 TRP B:201 B:197 78.0 0.306 -78.0 153.6 78.0 0.306 0.0 HOH
 4.377
 CB
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 TRP A:201 A:197 71.0 0.278 -69.2 143.8 71.0 0.278 0.0 SO4
HOH
 7.875
2.625
 O
O
 O4
O
TRP B:201 B:197 84.0 0.329 -62.2 137.7 84.0 0.329 0.0 NGA
HOH
 9.486
3.260
 C
N
 C5
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 TRP A:201 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 TRP G:201 G:197 77.0 0.302 -77.8 147.1 NA NA NA
TRP I:201 I:197 77.0 0.302 -77.9 149.4 NA NA NA
TRP J:201 J:197 146.0 0.573 -70.9 144.2 NA NA NA
TRP K:201 K:197 97.0 0.38 -79.7 145.5 97.0 0.38 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 TRP A:217 A:217 73.0 0.286 -61.9 140.9