Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr5 | 35873706 | . | G | A | CCDS3911.1:NM_002185.3:c.662aGt>aAt_NP_002176.2:p.221S>N | Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5j11 | 2 | D6RGV2 | 100.0 | 7e-163 |
X-RAY |
2017-04-05 | SER | B:222 | B:221 | 5.0 | 0.043 | -70.0 | 163.8 | 5.0 | 0.043 | 0.0 |
HOH |
7.522 |
HB3 |
O |
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3di2 | 2 | P16871 | 99.54 | 2e-162 |
X-RAY |
2009-01-27 | SER | B:205 | B:201 | 5.0 | 0.043 | -78.1 | 167.9 | 5.0 | 0.043 | 0.0 |
HOH |
4.211 |
CA |
O |
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SER | D:205 | D:201 | 5.0 | 0.043 | -80.1 | 164.9 | NA | NA | NA | ||||||||||||||
3di3 | 2 | P16871 | 99.54 | 2e-162 |
X-RAY |
2009-01-27 | SER | B:205 | B:201 | 2.0 | 0.017 | -74.9 | 151.5 | 2.0 | 0.017 | 0.0 |
HOH |
7.912 |
N |
O |
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3up1 | 1 | P16871 | 99.54 | 2e-162 |
X-RAY |
2012-02-08 | SER | A:205 | A:201 | 5.0 | 0.043 | -58.7 | 162.9 | 5.0 | 0.043 | 0.0 |
SO4 HOH |
7.296 2.935 |
N O |
O4 O |
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SER | B:205 | B:201 | 5.0 | 0.043 | -66.1 | 161.0 | 5.0 | 0.043 | 0.0 |
GOL HOH |
4.622 2.779 |
O O |
O2 O |
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6p50 | 1 | P16871 | 99.54 | 2e-162 |
X-RAY |
2019-09-04 | SER | A:205 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
6p67 | 3 | P16871 | 99.54 | 2e-162 |
X-RAY |
2019-09-04 | SER | G:205 | G:201 | 3.0 | 0.026 | -66.0 | 157.9 | NA | NA | NA | |||||||
SER | I:205 | I:201 | 4.0 | 0.035 | -68.3 | 158.0 | NA | NA | NA | ||||||||||||||
SER | J:205 | J:201 | 4.0 | 0.035 | -68.5 | 157.5 | NA | NA | NA | ||||||||||||||
SER | K:205 | K:201 | 4.0 | 0.035 | -67.8 | 158.2 | 4.0 | 0.035 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p16871-f1 | 1 | P16871 | 100.0 | 0.0 | SER | A:221 | A:221 | 5.0 | 0.043 | -55.7 | 158.4 |