Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35873719 . C A CCDS3911.1:NM_002185.3:c.675taC>taA_NP_002176.2:p.225Y>* Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 TYR B:226 B:225 119.0 0.517 E -113.5 142.2 119.0 0.517 0.0 HOH
 7.535
 HD1
 O
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 TYR B:209 B:205 135.0 0.587 E -121.0 126.0 135.0 0.587 0.0 HOH
 8.953
 O
 O
TYR D:209 D:205 158.0 0.687 E -117.0 126.8 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 TYR B:209 B:205 128.0 0.557 E -120.3 130.1 128.0 0.557 0.0 HOH
 7.498
 O
 O
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 TYR A:209 A:205 115.0 0.5 E -117.0 130.7 115.0 0.5 0.0 HOH
 3.088
 N
 O
TYR B:209 B:205 106.0 0.461 E -118.0 130.8 106.0 0.461 0.0 GOL
HOH
 4.519
3.296
 OH
N
 O3
O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 TYR A:209 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 TYR G:209 G:205 127.0 0.552 E -128.0 138.5 NA NA NA
TYR I:209 I:205 128.0 0.557 E -128.2 138.0 NA NA NA
TYR J:209 J:205 129.0 0.561 E -126.3 138.6 NA NA NA
TYR K:209 K:205 134.0 0.583 E -127.7 138.5 39.0 0.17 0.413 A:None:0.413

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 TYR A:225 A:225 122.0 0.53 E -119.5 127.1