Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 35873729 . C A CCDS3911.1:NM_002185.3:c.685Cca>Aca_NP_002176.2:p.229P>T Homo sapiens interleukin 7 receptor (IL7R), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5j11 2 D6RGV2 100.0 7e-163 X-RAY
 2017-04-05 PRO B:230 B:229 48.0 0.331 -66.6 160.1 48.0 0.331 0.0
3di2 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 PRO B:213 B:209 43.0 0.297 -56.3 170.0 43.0 0.297 0.0 HOH
 5.327
 N
 O
PRO D:213 D:209 133.0 0.917 -51.6 360.0 NA NA NA
3di3 2 P16871 99.54 2e-162 X-RAY
 2009-01-27 PRO B:213 B:209 73.0 0.503 -63.5 360.0 73.0 0.503 0.0
3up1 1 P16871 99.54 2e-162 X-RAY
 2012-02-08 PRO A:213 A:209 39.0 0.269 -64.1 159.2 39.0 0.269 0.0 HOH
 2.877
 O
 O
PRO B:213 B:209 40.0 0.276 -59.3 142.7 40.0 0.276 0.0 HOH
 2.701
 O
 O
6p50 1 P16871 99.54 2e-162 X-RAY
 2019-09-04 PRO A:213 NA:NA DO NA DO DO DO NA NA NA
6p67 3 P16871 99.54 2e-162 X-RAY
 2019-09-04 PRO G:213 G:209 39.0 0.269 -58.3 160.1 NA NA NA
PRO I:213 I:209 48.0 0.331 -64.3 158.8 NA NA NA
PRO J:213 J:209 46.0 0.317 -64.0 158.9 NA NA NA
PRO K:213 K:209 51.0 0.352 -61.5 155.7 17.0 0.117 0.235 A:None:0.234

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p16871-f1 1 P16871 100.0 0.0 PRO A:229 A:229 38.0 0.262 -53.9 147.7