Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 122365037 . T A CCDS4133.1:NM_000943.4:c.194aAg>aTg_NP_000934.1:p.65K>M Homo sapiens peptidylprolyl isomerase C (PPIC), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2esl 1 P45877 100.0 3e-136 X-RAY
2005-12-13 LYS A:43 A:65 80.0 0.4 H -70.6 -43.5 80.0 0.4 0.0 HOH
2.772
NZ
O
LYS B:43 B:65 80.0 0.4 H -69.7 -40.6 NA NA NA
LYS C:43 C:65 72.0 0.36 H -71.4 -43.6 NA NA NA
LYS D:43 D:65 73.0 0.365 H -70.4 -41.0 NA NA NA
LYS E:43 E:65 87.0 0.435 H -70.8 -42.1 NA NA NA
LYS F:43 F:65 78.0 0.39 H -70.4 -39.4 NA NA NA
2rmc 1 P30412 92.86 3e-122 X-RAY
1995-02-14 LYS A:35 A:65 78.0 0.39 H -69.5 -37.8 78.0 0.39 0.0 HOH
4.222
CB
H1
LYS C:35 C:65 110.0 0.55 H -74.8 -39.1 NA NA NA
LYS E:35 E:65 107.0 0.535 H -69.7 -45.6 NA NA NA
LYS G:35 G:65 90.0 0.45 H -75.0 -42.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p45877-f1 1 P45877 100.0 2e-154 LYS A:65 A:65 132.0 0.66 H -69.6 -42.7