Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 141385739 . C A CCDS4272.1:NM_005471.4:c.379Gct>Tct_NP_005462.1:p.127A>S Homo sapiens glucosamine-6-phosphate deaminase 1 (GNPDA1), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ne7 1 P46926 100.0 0.0 X-RAY
 2003-09-23 ALA A:127 A:127 88.0 0.765 H -62.9 -31.0 88.0 0.765 0.0 HOH
 2.926
 O
 O
ALA B:127 B:127 87.0 0.757 H -64.6 -27.1 87.0 0.757 0.0 HOH
 3.012
 O
 O
ALA C:127 C:127 88.0 0.765 H -63.6 -32.1 88.0 0.765 0.0 HOH
 2.971
 O
 O
ALA D:127 D:127 89.0 0.774 H -63.0 -29.4 89.0 0.774 0.0 HOH
 3.554
 CA
 O
ALA E:127 E:127 88.0 0.765 H -62.8 -29.8 88.0 0.765 0.0 HOH
 3.445
 CA
 O
ALA F:127 F:127 91.0 0.791 H -62.1 -27.9 91.0 0.791 0.0 HOH
 3.386
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p46926-f1 1 P46926 100.0 0.0 ALA A:127 A:127 92.0 0.8 H -63.1 -27.5
af-q8tdq7-f1 1 Q8TDQ7 87.96 0.0 GLU A:127 A:127 161.0 0.847 H -64.2 -31.7