Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 141385831 . T A CCDS4272.1:NM_005471.4:c.287cAc>cTc_NP_005462.1:p.96H>L Homo sapiens glucosamine-6-phosphate deaminase 1 (GNPDA1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ne7 1 P46926 100.0 0.0 X-RAY
 2003-09-23 HIS A:96 A:96 69.0 0.354 G -102.3 -1.4 69.0 0.354 0.0 HOH
 2.585
 O
 O
HIS B:96 B:96 70.0 0.359 G -98.8 -2.5 70.0 0.359 0.0 HOH
 2.798
 O
 O
HIS C:96 C:96 66.0 0.338 G -100.1 0.1 66.0 0.338 0.0 HOH
 2.912
 O
 O
HIS D:96 D:96 63.0 0.323 G -104.4 -3.2 63.0 0.323 0.0 HOH
 2.859
 O
 O
HIS E:96 E:96 69.0 0.354 G -95.6 -2.9 69.0 0.354 0.0 HOH
 2.813
 NE2
 O
HIS F:96 F:96 82.0 0.421 G -100.2 -6.0 82.0 0.421 0.0 HOH
 2.911
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p46926-f1 1 P46926 100.0 0.0 HIS A:96 A:96 63.0 0.323 G -106.6 1.6
af-q8tdq7-f1 1 Q8TDQ7 87.96 0.0 HIS A:96 A:96 66.0 0.338 G -106.4 2.6