Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 141391593 . A C CCDS4272.1:NM_005471.4:c.8cTc>cGc_NP_005462.1:p.3L>R Homo sapiens glucosamine-6-phosphate deaminase 1 (GNPDA1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ne7 1 P46926 100.0 0.0 X-RAY
 2003-09-23 LEU A:3 A:3 0.0 0.0 E -107.2 115.4 0.0 0.0 0.0 16G
HOH
 6.919
2.715
 N
O
 C6
O
LEU B:3 B:3 0.0 0.0 E -107.9 111.9 0.0 0.0 0.0 16G
HOH
 6.866
2.764
 N
O
 C6
O
LEU C:3 C:3 0.0 0.0 E -114.5 111.9 0.0 0.0 0.0 16G
HOH
 6.933
2.743
 N
O
 C6
O
LEU D:3 D:3 0.0 0.0 E -110.0 114.4 0.0 0.0 0.0 16G
HOH
 7.000
2.733
 N
O
 C6
O
LEU E:3 E:3 0.0 0.0 E -105.0 113.6 0.0 0.0 0.0 16G
HOH
 6.940
2.673
 N
O
 C6
O
LEU F:3 F:3 0.0 0.0 E -112.4 114.3 0.0 0.0 0.0 16G
HOH
 6.929
2.702
 N
O
 C6
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p46926-f1 1 P46926 100.0 0.0 LEU A:3 A:3 0.0 0.0 E -119.6 118.4
af-q8tdq7-f1 1 Q8TDQ7 87.96 0.0 LEU A:3 A:3 0.0 0.0 E -119.3 121.1