Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153674475 . G A CCDS4325.1:NM_198321.3:c.259Gta>Ata_NP_938080.1:p.87V>I Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 VAL A:54 A:87 126.0 0.813 -134.7 146.8 126.0 0.813 0.0 NAG
HOH
 9.043
3.015
 O
N
 C8
O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 VAL A:54 A:87 126.0 0.813 -127.8 150.8 126.0 0.813 0.0 NAG
HOH
 8.863
2.945
 O
O
 C8
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 VAL A:87 A:87 129.0 0.832 -128.2 147.7