Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153709239 . A C CCDS4325.1:NM_198321.3:c.509aAt>aCt_NP_938080.1:p.170N>T Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ASN A:137 A:170 86.0 0.537 H -85.8 -13.2 86.0 0.537 0.0 NAG
NAG
HOH
 2.445
5.070
3.272
 ND2
ND2
OD1
 O6
O5
O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ASN A:137 A:170 85.0 0.531 H -100.2 -27.3 85.0 0.531 0.0 NAG
NAG
HOH
 2.594
5.694
5.194
 ND2
ND2
O
 O6
C1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 ASN A:170 A:170 85.0 0.531 H -84.9 -23.0