Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153709262 . G A CCDS4325.1:NM_198321.3:c.532Gcc>Acc_NP_938080.1:p.178A>T Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ALA A:145 A:178 43.0 0.374 E -73.1 -37.9 43.0 0.374 0.0 NAG
HOH
 3.363
4.068
 CB
CA
 N2
O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ALA A:145 A:178 43.0 0.374 E -67.1 -46.0 43.0 0.374 0.0 NAG
HOH
 3.433
7.210
 CB
N
 O6
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 ALA A:178 A:178 43.0 0.374 E -65.4 -41.8