Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153709296 . G A CCDS4325.1:NM_198321.3:c.566cGa>cAa_NP_938080.1:p.189R>Q Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
pdb_id: 
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auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ARG A:156 A:189 57.0 0.253 -71.6 130.3 57.0 0.253 0.0 UDP
HOH
 9.782
2.510
 NH2
NH2
 O2'
O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ARG A:156 A:189 52.0 0.231 -83.0 128.6 52.0 0.231 0.0 UDP
HOH
 9.863
5.339
 NH2
CD
 O2'
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 ARG A:189 A:189 52.0 0.231 -69.1 126.8