Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153755870 . C A CCDS4325.1:NM_198321.3:c.602gCc>gAc_NP_938080.1:p.201A>D Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ALA A:168 A:201 78.0 0.678 T -63.9 -18.5 78.0 0.678 0.0 NAG
HOH
 7.248
3.671
 C
O
 C8
O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ALA A:168 A:201 75.0 0.652 H -58.1 -32.9 75.0 0.652 0.0 NAG
HOH
 7.009
3.592
 C
CA
 C8
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 ALA A:201 A:201 82.0 0.713 T -59.7 -19.2