Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153789140 . G A CCDS4325.1:NM_198321.3:c.1204Gca>Aca_NP_938080.1:p.402A>T Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ALA A:369 A:402 3.0 0.026 H -57.9 -34.8 3.0 0.026 0.0 HOH
 6.934
 CB
 O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ALA A:369 A:402 2.0 0.017 G -61.0 -36.3 2.0 0.017 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 ALA A:402 A:402 6.0 0.052 H -56.3 -32.1