Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153789293 . G A CCDS4325.1:NM_198321.3:c.1357Gtg>Atg_NP_938080.1:p.453V>M Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 VAL A:420 A:453 98.0 0.632 S -133.9 108.9 98.0 0.632 0.0 NAG
HOH
 9.980
4.273
 CG1
CG1
 O4
O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 VAL A:420 A:453 93.0 0.6 S -137.7 122.8 93.0 0.6 0.0 NAG
 9.435
 CG1
 C8

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 VAL A:453 A:453 95.0 0.613 S -119.0 116.3