Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153789299 . C A CCDS4325.1:NM_198321.3:c.1363Ccc>Acc_NP_938080.1:p.455P>T Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
pdb_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 PRO A:422 A:455 61.0 0.421 -60.6 153.6 61.0 0.421 0.0 NAG
HOH
 5.973
2.813
 CB
CB
 C8
O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 PRO A:422 A:455 64.0 0.441 -61.3 150.7 64.0 0.441 0.0 NAG
HOH
 6.292
6.198
 CA
O
 C8
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 PRO A:455 A:455 60.0 0.414 -59.4 155.0