Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153789316 . G A CCDS4325.1:NM_198321.3:c.1380tgG>tgA_NP_938080.1:p.460W>* Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 TRP A:427 A:460 78.0 0.306 E -156.7 154.2 78.0 0.306 0.0 NAG
HOH
 6.081
7.440
 CH2
CD1
 O6
O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 TRP A:427 A:460 84.0 0.329 E -150.9 151.8 84.0 0.329 0.0 NAG
HOH
 4.748
4.515
 CH2
CZ3
 O6
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 TRP A:460 A:460 90.0 0.353 E -156.8 166.6