Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153792537 . G A CCDS4325.1:NM_198321.3:c.1475cGt>cAt_NP_938080.1:p.492R>H Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ARG A:459 A:492 186.0 0.827 -107.2 17.0 186.0 0.827 0.0 HOH
 3.704
 CG
 O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ARG A:459 A:492 185.0 0.822 -99.8 -14.6 185.0 0.822 0.0 HOH
 3.321
 C
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 ARG A:492 A:492 219.0 0.973 T -109.2 -13.7