Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153795386 . C A CCDS4325.1:NM_198321.3:c.1547cCc>cAc_NP_938080.1:p.516P>H Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 PRO A:483 A:516 54.0 0.372 T -55.7 -5.8 54.0 0.372 0.0 NAG
HOH
 8.997
6.805
 CG
O
 O6
O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 PRO A:483 A:516 59.0 0.407 T -58.2 -16.7 59.0 0.407 0.0 NAG
HOH
 8.609
5.301
 CG
CB
 O6
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 PRO A:516 A:516 57.0 0.393 T -63.2 -16.0