Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 153795448 . G A CCDS4325.1:NM_198321.3:c.1609Gac>Aac_NP_938080.1:p.537D>N Homo sapiens polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2d7i 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ASP A:504 A:537 93.0 0.62 B -50.1 141.3 93.0 0.62 0.0 HOH
 6.493
 O
 O
2d7r 1 Q86SR1 100.0 0.0 X-RAY
 2006-11-07 ASP A:504 A:537 86.0 0.573 E -49.7 137.7 86.0 0.573 0.0 SER
A2G
HOH
 8.462
5.586
7.229
 O
O
C
 OG
O3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q86sr1-f1 1 Q86SR1 100.0 0.0 ASP A:537 A:537 78.0 0.52 E -64.3 123.7