Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158743734 . T A CCDS4346.1:NM_002187.2:c.946Agc>Tgc_NP_002178.2:p.316S>C Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 SER B:316 B:294 106.0 0.922 -72.6 74.5 61.0 0.53 0.392 A:Q9NPF7:0.391
 HOH
 3.574
 N
 O
SER D:316 D:294 107.0 0.93 -73.0 74.3 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 SER B:316 A:316 101.0 0.878 -79.0 107.3 53.0 0.461 0.417 A:Q9NPF7:0.417
 HOH
 4.673
 H
 O
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 SER A:316 A:316 100.0 0.87 -75.6 74.1 58.0 0.504 0.366 B:Q9NPF7:0.365
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 SER A:316 A:316 106.0 0.922 -87.7 78.0 56.0 0.487 0.435 B:Q9NPF7:0.435
SER C:316 C:316 111.0 0.965 -80.5 72.0 NA NA NA
SER E:316 E:316 111.0 0.965 -83.8 71.7 NA NA NA
SER G:316 G:316 105.0 0.913 -83.8 74.8 NA NA NA
SER I:316 I:316 111.0 0.965 -78.2 75.2 NA NA NA
SER K:316 K:316 107.0 0.93 -87.4 66.0 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 SER A:296 A:316 101.0 0.878 -77.6 82.9 64.0 0.557 0.321 B:Q9NPF7:0.322
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 SER A:296 A:294 106.0 0.922 -85.9 64.3 61.0 0.53 0.392 C:Q9NPF7:0.391
 HOH
 3.569
 O
 O
SER B:296 B:294 111.0 0.965 -81.8 62.0 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 SER A:294 A:294 107.0 0.93 -73.1 63.3 107.0 0.93 0.0 MNB
HOH
 9.913
4.047
 O
O
 O8
O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 SER A:294 A:294 7.0 0.061 -46.7 133.1 6.0 0.052 0.009 B:P29459:0.009
 HOH
 7.118
 N
 O
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 SER A:294 A:294 117.0 1.0 -78.3 55.4 117.0 1.0 0.0
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 SER A:294 A:294 59.0 0.513 180.0 -98.7 9.0 0.078 0.435 B:Q9NPF7:0.27
C:None:0.304
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 SER A:294 A:316 107.0 0.93 -85.7 87.8 58.0 0.504 0.426 B:Q9NPF7:0.426
 HOH
 2.843
 OG
 O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 SER A:294 A:316 108.0 0.939 -85.2 87.4 63.0 0.548 0.391 B:Q9NPF7:0.391
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 SER B:298 B:294 107.0 0.93 -71.7 75.2 12.0 0.104 0.826 A:Q9NPF7:0.617
C:None:0.496
 HOH
 2.798
 N
 O
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 SER D:294 D:294 106.0 0.922 -75.3 69.6 61.0 0.53 0.392 C:Q9NPF7:0.391
 HOH
 3.138
 O
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 SER B:294 B:294 103.0 0.896 -70.7 65.7 56.0 0.487 0.409 A:Q9NPF7:0.409
SER D:294 D:294 107.0 0.93 -70.6 98.8 38.0 0.33 0.6 C:Q9NPF7:0.6

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 SER A:316 A:316 111.0 0.965 -81.3 63.0