Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158743780 . G A CCDS4346.1:NM_002187.2:c.900tgC>tgT_NP_002178.2:p.300C>C Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 CYS B:300 B:278 8.0 0.059 -90.1 128.1 8.0 0.059 0.0 HOH
 6.071
 N
 O
CYS D:300 D:278 37.0 0.274 -85.4 122.0 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 CYS B:300 A:300 17.0 0.126 -98.2 132.0 17.0 0.126 0.0
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 CYS A:300 A:300 10.0 0.074 -101.9 152.8 10.0 0.074 0.0
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 CYS A:300 A:300 13.0 0.096 -103.2 155.9 13.0 0.096 0.0
CYS C:300 C:300 8.0 0.059 -103.2 150.7 NA NA NA
CYS E:300 E:300 23.0 0.17 -101.0 154.3 NA NA NA
CYS G:300 G:300 45.0 0.333 -103.7 149.6 NA NA NA
CYS I:300 I:300 31.0 0.23 -96.6 159.0 NA NA NA
CYS K:300 K:300 23.0 0.17 -109.4 148.7 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 CYS A:280 A:300 21.0 0.156 -93.7 153.4 21.0 0.156 0.0
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 CYS A:280 A:278 24.0 0.178 -86.7 162.3 24.0 0.178 0.0 HOH
 9.729
 SG
 O
CYS B:280 B:278 13.0 0.096 -85.9 113.4 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 CYS A:278 A:278 24.0 0.178 -89.7 158.5 24.0 0.178 0.0 HOH
 8.834
 CB
 O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 CYS A:278 A:278 24.0 0.178 -82.1 160.3 24.0 0.178 0.0
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 CYS A:278 A:278 39.0 0.289 -77.5 170.3 39.0 0.289 0.0
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 CYS A:278 A:278 33.0 0.244 -72.1 114.1 33.0 0.244 0.0
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 CYS A:278 A:300 6.0 0.044 -89.1 167.1 6.0 0.044 0.0 NA
HOH
 6.639
4.482
 HB2
HB2
 NA
O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 CYS A:278 A:300 44.0 0.326 -87.0 82.9 44.0 0.326 0.0
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 CYS B:282 B:278 17.0 0.126 -98.0 132.4 17.0 0.126 0.0
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 CYS D:278 D:278 27.0 0.2 -76.1 112.4 27.0 0.2 0.0 HOH
 5.082
 O
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 CYS B:278 B:278 8.0 0.059 -68.7 128.6 8.0 0.059 0.0
CYS D:278 D:278 22.0 0.163 -105.0 128.1 22.0 0.163 0.0 MAN
 9.755
 C
 O5

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 CYS A:300 A:300 15.0 0.111 -81.3 124.4