Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158743808 . G A CCDS4346.1:NM_002187.2:c.872aCg>aTg_NP_002178.2:p.291T>M Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 THR B:291 B:269 28.0 0.2 E -148.3 152.6 28.0 0.2 0.0 HOH
 2.615
 OG1
 O
THR D:291 D:269 35.0 0.25 E -146.6 153.2 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 THR B:291 A:291 33.0 0.236 E -143.7 148.1 33.0 0.236 0.0 HOH
 7.190
 HG1
 O
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 THR A:291 A:291 25.0 0.179 E -165.9 153.3 25.0 0.179 0.0
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 THR A:291 A:291 30.0 0.214 E -168.2 164.5 30.0 0.214 0.0
THR C:291 C:291 29.0 0.207 E -168.6 156.8 NA NA NA
THR E:291 E:291 29.0 0.207 E -163.9 165.1 NA NA NA
THR G:291 G:291 31.0 0.221 E -166.6 160.4 NA NA NA
THR I:291 I:291 51.0 0.364 E -161.3 174.6 NA NA NA
THR K:291 K:291 30.0 0.214 E -167.5 154.3 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 THR A:271 A:291 23.0 0.164 E -160.4 154.7 23.0 0.164 0.0
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 THR A:271 A:269 26.0 0.186 E -160.9 142.8 26.0 0.186 0.0 HOH
 2.927
 OG1
 O
THR B:271 B:269 22.0 0.157 E -145.0 150.1 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 THR A:269 A:269 21.0 0.15 E -155.9 147.5 21.0 0.15 0.0 MNB
HOH
 8.431
2.920
 N
OG1
 S5
O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 THR A:269 A:269 28.0 0.2 E -163.2 165.4 28.0 0.2 0.0
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 THR A:269 A:269 31.0 0.221 E -169.2 155.9 31.0 0.221 0.0
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 THR A:269 A:269 29.0 0.207 E -156.4 150.6 29.0 0.207 0.0
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 THR A:269 A:291 29.0 0.207 E -151.8 150.3 29.0 0.207 0.0 HOH
 2.159
 HG1
 O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 THR A:269 A:291 31.0 0.221 E -152.0 150.2 31.0 0.221 0.0
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 THR B:273 B:269 19.0 0.136 E -154.3 154.1 14.0 0.1 0.036 C:None:0.036
 HOH
 7.308
 C
 O
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 THR D:269 D:269 25.0 0.179 E -160.2 151.4 25.0 0.179 0.0 HOH
 3.060
 OG1
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 THR B:269 B:269 29.0 0.207 E -157.2 129.8 29.0 0.207 0.0
THR D:269 D:269 23.0 0.164 -130.2 169.5 23.0 0.164 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 THR A:291 A:291 27.0 0.193 E -152.8 146.4