Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158743817 . C A CCDS4346.1:NM_002187.2:c.863aGa>aTa_NP_002178.2:p.288R>I Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 ARG B:288 B:266 136.0 0.604 E -110.3 147.8 73.0 0.324 0.28 J:None:0.28
 HOH
 4.704
 NH2
 O
ARG D:288 D:266 120.0 0.533 E -108.2 134.7 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 ARG B:288 A:288 132.0 0.587 E -118.6 137.3 132.0 0.587 0.0 HOH
 2.266
 HH22
 O
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 ARG A:288 A:288 110.0 0.489 E -85.1 138.5 110.0 0.489 0.0
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 ARG A:288 A:288 137.0 0.609 E -130.6 147.9 137.0 0.609 0.0
ARG C:288 C:288 166.0 0.738 360.0 153.4 NA NA NA
ARG E:288 E:288 171.0 0.76 360.0 151.2 NA NA NA
ARG G:288 G:288 159.0 0.707 E -90.7 143.5 NA NA NA
ARG I:288 I:288 168.0 0.747 360.0 150.2 NA NA NA
ARG K:288 K:288 121.0 0.538 E -105.9 158.1 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 ARG A:268 A:288 134.0 0.596 -85.4 133.7 134.0 0.596 0.0
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 ARG A:268 A:266 114.0 0.507 E -145.1 121.6 114.0 0.507 0.0 HOH
 4.335
 O
 O
ARG B:268 B:266 101.0 0.449 E -127.4 135.0 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 ARG A:266 A:266 211.0 0.938 360.0 111.7 211.0 0.938 0.0 MNB
 2.656
 NH1
 O12
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 ARG A:266 A:266 96.0 0.427 E -113.5 173.0 96.0 0.427 0.0
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 ARG A:266 A:266 54.0 NA -73.0 137.4 54.0 NA NA
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 ARG A:266 A:266 110.0 0.489 E -126.8 138.5 52.0 0.231 0.258 C:None:0.258
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 ARG A:266 A:288 108.0 0.48 E -129.9 145.1 108.0 0.48 0.0 HOH
 1.792
 HH11
 O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 ARG A:266 A:288 118.0 0.524 E -129.2 144.6 118.0 0.524 0.0
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 ARG B:270 B:266 110.0 0.489 E -100.7 142.7 110.0 0.489 0.0 HOH
 5.230
 NH1
 O
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 ARG D:266 D:266 48.0 NA E -132.0 141.6 48.0 NA NA HOH
 2.765
 CD
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 ARG B:266 B:266 117.0 0.52 E -111.4 163.8 117.0 0.52 0.0 PO4
 2.669
 NH1
 O3
ARG D:266 D:266 19.0 NA -76.0 139.3 19.0 NA NA MAN
PO4
 9.740
6.971
 N
CB
 O6
O2

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 ARG A:288 A:288 107.0 0.476 E -123.6 125.2