Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158745770 . C A CCDS4346.1:NM_002187.2:c.829Gtc>Ttc_NP_002178.2:p.277V>F Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 VAL B:277 B:255 20.0 0.129 E -88.1 112.5 20.0 0.129 0.0 HOH
 4.367
 CG2
 O
VAL D:277 D:255 8.0 0.052 E -112.9 112.4 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 VAL B:277 A:277 2.0 0.013 E -115.5 122.2 2.0 0.013 0.0
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 VAL A:277 A:277 8.0 0.052 E -89.3 150.7 8.0 0.052 0.0
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 VAL A:277 A:277 30.0 0.194 E -120.0 103.2 30.0 0.194 0.0
VAL C:277 C:277 36.0 0.232 E -123.5 112.3 NA NA NA
VAL E:277 E:277 36.0 0.232 E -125.0 122.5 NA NA NA
VAL G:277 G:277 5.0 0.032 E -120.4 110.0 NA NA NA
VAL I:277 I:277 57.0 0.368 E -126.2 110.1 NA NA NA
VAL K:277 K:277 12.0 0.077 E -125.8 99.8 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 VAL A:257 A:277 12.0 0.077 E -113.1 126.2 12.0 0.077 0.0
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 VAL A:257 A:255 1.0 0.006 E -115.7 118.1 1.0 0.006 0.0 HOH
 4.382
 C
 O
VAL B:257 B:255 7.0 0.045 E -111.0 104.3 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 VAL A:255 A:255 60.0 0.387 E -101.9 105.9 60.0 0.387 0.0 MNB
 7.557
 N
 S5
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 VAL A:255 A:255 19.0 0.123 E -127.1 130.3 19.0 0.123 0.0
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 VAL A:255 A:255 48.0 0.31 -176.1 -154.8 48.0 0.31 0.0
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 VAL A:255 A:255 19.0 0.123 E -103.8 135.1 19.0 0.123 0.0
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 VAL A:255 A:277 8.0 0.052 E -106.3 122.1 8.0 0.052 0.0 HOH
 2.756
 O
 O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 VAL A:255 A:277 23.0 0.148 E -106.8 122.4 23.0 0.148 0.0
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 VAL B:259 B:255 18.0 0.116 E -107.0 121.8 18.0 0.116 0.0
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 VAL D:255 D:255 15.0 0.097 E -104.3 140.5 15.0 0.097 0.0 HOH
 4.605
 O
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 VAL B:255 B:255 14.0 0.09 -89.7 -86.3 14.0 0.09 0.0
VAL D:255 D:255 63.0 0.406 -146.8 360.0 63.0 0.406 0.0 MAN
PO4
 3.942
9.351
 O
N
 C1
O2

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 VAL A:277 A:277 19.0 0.123 E -92.5 114.8