Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158747368 . C A CCDS4346.1:NM_002187.2:c.643Gtt>Ttt_NP_002178.2:p.215V>F Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 VAL B:215 B:193 18.0 0.116 E -124.0 116.9 18.0 0.116 0.0 HOH
 3.091
 O
 O
VAL D:215 D:193 17.0 0.11 E -125.2 116.7 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 VAL B:215 A:215 26.0 0.168 E -119.3 128.5 26.0 0.168 0.0 NAG
HOH
 9.397
6.996
 HG23
H
 O7
O
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 VAL A:215 A:215 22.0 0.142 E -126.4 133.4 22.0 0.142 0.0 NAG
HOH
 9.539
3.192
 HG23
HG23
 O7
O
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 VAL A:215 A:215 24.0 0.155 E -133.4 114.3 24.0 0.155 0.0 NAG
 9.851
 CG2
 O7
VAL C:215 C:215 26.0 0.168 E -134.8 112.4 NA NA NA
VAL E:215 E:215 28.0 0.181 E -141.3 116.5 NA NA NA
VAL G:215 G:215 27.0 0.174 E -138.8 109.5 NA NA NA
VAL I:215 I:215 30.0 0.194 E -128.4 123.1 NA NA NA
VAL K:215 K:215 26.0 0.168 E -137.2 120.0 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 VAL A:195 A:215 28.0 0.181 E -133.0 116.7 28.0 0.181 0.0
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 VAL A:195 A:193 16.0 0.103 E -118.8 116.2 16.0 0.103 0.0 NAG
HOH
 9.993
3.060
 CG2
O
 O7
O
VAL B:195 B:193 17.0 0.11 E -130.7 118.7 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 VAL A:193 A:193 23.0 0.148 E -120.1 116.5 23.0 0.148 0.0 NAG
HOH
 9.384
3.813
 CG2
CG1
 C8
O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 VAL A:193 A:193 8.0 0.052 E -136.9 104.5 8.0 0.052 0.0 NAG
 9.779
 CG2
 O7
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 VAL A:193 A:193 10.0 0.065 E -121.6 118.2 10.0 0.065 0.0 NAG
HOH
 9.625
3.923
 CG2
CG2
 O7
O
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 VAL A:193 A:193 22.0 0.142 E -130.0 117.6 22.0 0.142 0.0 NAG
 9.535
 CG2
 O7
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 VAL A:193 A:215 25.0 0.161 E -128.0 122.3 25.0 0.161 0.0 NAG
PG4
HOH
 9.556
2.575
3.026
 HG22
HG21
HG23
 H2
H31
O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 VAL A:193 A:215 22.0 0.142 E -127.8 122.6 22.0 0.142 0.0 NAG
 9.177
 HG23
 HN2
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 VAL B:197 B:193 20.0 0.129 E -129.4 109.4 20.0 0.129 0.0 NAG
HOH
 9.930
8.620
 CG2
CG2
 O7
O
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 VAL D:193 D:193 17.0 0.11 E -132.3 117.8 17.0 0.11 0.0 HOH
 3.161
 O
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 VAL B:193 B:193 7.0 0.045 E -100.8 115.5 7.0 0.045 0.0
VAL D:193 D:193 7.0 0.045 -135.8 116.1 7.0 0.045 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 VAL A:215 A:215 26.0 0.168 E -119.4 117.3