Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158749420 . C A CCDS4346.1:NM_002187.2:c.464aGt>aTt_NP_002178.2:p.155S>I Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 SER B:155 B:133 49.0 0.426 E -132.9 124.9 49.0 0.426 0.0 NAG
HOH
 7.988
3.488
 O
CA
 C8
O
SER D:155 D:133 45.0 0.391 E -133.4 124.5 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 SER B:155 A:155 61.0 0.53 E -133.8 130.2 61.0 0.53 0.0 NAG
HOH
 7.002
2.832
 O
HA
 H82
O
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 SER A:155 A:155 66.0 0.574 E -155.4 124.2 66.0 0.574 0.0 NAG
HOH
 7.386
3.320
 O
HB2
 H81
O
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 SER A:155 A:155 52.0 0.452 E -135.0 124.4 52.0 0.452 0.0 NAG
 7.773
 O
 O7
SER C:155 C:155 56.0 0.487 E -143.8 126.7 NA NA NA
SER E:155 E:155 56.0 0.487 E -133.7 126.4 NA NA NA
SER G:155 G:155 57.0 0.496 E -142.2 125.7 NA NA NA
SER I:155 I:155 62.0 0.539 E -138.3 123.4 NA NA NA
SER K:155 K:155 60.0 0.522 E -140.0 133.4 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 SER A:135 A:155 64.0 0.557 E -148.0 120.2 64.0 0.557 0.0
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 SER A:135 A:133 56.0 0.487 E -119.3 128.6 56.0 0.487 0.0 NAG
HOH
 8.180
5.149
 O
N
 C8
O
SER B:135 B:133 33.0 0.287 E -119.4 130.8 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 SER A:133 A:133 73.0 0.635 E -137.9 124.2 73.0 0.635 0.0 NAG
HOH
 7.967
3.239
 O
O
 C8
O
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 SER A:133 A:133 48.0 0.417 E -105.6 157.0 48.0 0.417 0.0 NAG
 7.380
 OG
 O7
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 SER A:133 A:133 36.0 0.313 E -163.1 128.1 36.0 0.313 0.0 NAG
HOH
 7.239
4.257
 OG
CB
 O7
O
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 SER A:133 A:133 67.0 0.583 E -136.8 127.3 67.0 0.583 0.0 NAG
 6.930
 O
 C8
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 SER A:133 A:155 63.0 0.548 E -138.1 132.8 63.0 0.548 0.0 NAG
PG4
HOH
 7.392
2.058
2.559
 O
HG
HG
 H82
H11
O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 SER A:133 A:155 65.0 0.565 E -138.0 132.5 65.0 0.565 0.0 NAG
 7.256
 O
 H82
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 SER B:137 B:133 65.0 0.565 E -112.8 129.4 65.0 0.565 0.0 NAG
HOH
 7.702
4.688
 O
N
 C8
O
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 SER D:133 D:133 51.0 0.443 E -138.5 131.7 51.0 0.443 0.0 HOH
 2.758
 OG
 O
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 SER B:133 B:133 57.0 0.496 E -99.1 131.8 57.0 0.496 0.0
SER D:133 D:133 20.0 0.174 E -125.3 115.6 20.0 0.174 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 SER A:155 A:155 56.0 0.487 E -128.1 132.4