Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 158749513 . T A CCDS4346.1:NM_002187.2:c.371aAa>aTa_NP_002178.2:p.124K>I Homo sapiens interleukin 12B (IL12B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4grw 2 P29460 100.0 0.0 X-RAY
 2014-02-19 LYS B:124 B:102 152.0 0.76 S -108.7 -156.7 143.0 0.715 0.045 J:None:0.045
 HOH
 6.246
 NZ
 O
LYS D:124 D:102 155.0 0.775 S -158.4 165.4 NA NA NA
5mxa 2 P29460 100.0 0.0 X-RAY
 2017-12-20 LYS B:124 A:124 59.0 NA S -130.5 -179.8 59.0 NA NA
5mzv 1 P29460 100.0 0.0 X-RAY
 2018-01-03 LYS A:124 A:124 139.0 0.695 S -105.8 156.7 79.0 0.395 0.3 B:Q9NPF7:0.195
C:Q5VWK5:0.125
 HOH
 6.019
 HZ3
 O
5njd 1 P29460 100.0 0.0 X-RAY
 2018-01-03 LYS A:124 A:124 149.0 0.745 S -154.9 163.6 102.0 0.51 0.235 B:Q9NPF7:0.02
U:None:0.22
LYS C:124 C:124 137.0 0.685 S -154.3 179.3 NA NA NA
LYS E:124 E:124 147.0 0.735 S -148.6 176.3 NA NA NA
LYS G:124 G:124 152.0 0.76 S -154.5 165.7 NA NA NA
LYS I:124 I:124 146.0 0.73 S -158.5 179.7 NA NA NA
LYS K:124 K:124 149.0 0.745 S -152.6 171.2 NA NA NA
6wdq 1 P29460 100.0 0.0 X-RAY
 2021-02-24 LYS A:104 A:124 154.0 0.77 S -116.5 -174.1 33.0 0.165 0.605 B:Q9NPF7:0.255
C:Q5VWK5:0.43
 NAG
 5.349
 C
 C8
3duh 1 P29460 99.35 0.0 X-RAY
 2008-08-19 LYS A:104 A:102 60.0 NA S -125.9 -171.7 60.0 NA NA
LYS B:104 B:102 61.0 NA S -163.7 143.3 NA NA NA
1f42 1 P29460 100.0 0.0 X-RAY
 2001-06-13 LYS A:102 A:102 82.0 NA T -163.5 68.9 82.0 NA NA
1f45 1 P29460 100.0 0.0 X-RAY
 2001-06-20 LYS A:102 A:102 80.0 NA T -171.9 19.7 80.0 NA NA HOH
 7.905
 CB
 O
3hmx 1 P29460 100.0 0.0 X-RAY
 2010-06-09 LYS A:102 A:102 80.0 NA S -79.9 -126.9 80.0 NA NA
3qwr 1 P29460 100.0 0.0 X-RAY
 2012-02-01 LYS A:102 A:102 61.0 NA S -146.4 -178.2 30.0 NA NA C:None:NA
5mj3 1 P29460 100.0 0.0 X-RAY
 2017-01-11 LYS A:102 A:124 153.0 0.765 S -157.3 173.8 81.0 0.405 0.36 B:Q9NPF7:0.265
C:None:0.09
 HOH
 1.759
 HZ2
 O
5mj4 1 P29460 100.0 0.0 X-RAY
 2017-01-11 LYS A:102 A:124 57.0 NA S -157.4 173.8 39.0 NA NA B:Q9NPF7:NA
6uib 2 P29460 100.0 0.0 X-RAY
 2020-07-15 LYS B:106 NA:NA DO NA DO DO DO NA NA NA
3d85 4 P29460 99.67 0.0 X-RAY
 2008-09-02 LYS D:102 NA:NA DO NA DO DO DO NA NA NA
3d87 2 P29460 99.67 0.0 X-RAY
 2008-09-02 LYS B:102 B:102 92.0 NA S -124.7 127.8 34.0 NA NA C:Q9NPF7:NA
LYS D:102 D:102 73.0 NA S -100.6 -119.4 36.0 NA NA A:Q9NPF7:NA
C:Q9NPF7:NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p29460-f1 1 P29460 100.0 0.0 LYS A:124 A:124 150.0 0.75 S -140.0 168.5