Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180218668 . A C CCDS4458.1:NM_001114617.1:c.1304cTg>cGg_NP_001108089.1:p.435L>R Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 GLN A:338 A:437 119.0 0.661 T -65.9 -6.1 119.0 0.661 0.0 HOH
 2.649
 O
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 GLN A:338 A:437 138.0 0.767 T -58.8 -7.1 138.0 0.767 0.0 HOH
 2.751
 N
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 GLN A:333 A:437 119.0 0.661 T -65.8 -6.4 119.0 0.661 0.0 HOH
 2.600
 O
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:332 A:437 132.0 0.733 T -64.2 -4.5 132.0 0.733 0.0 GOL
HOH
 9.850
2.857
 N
N
 O3
O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:332 A:437 131.0 0.728 T -64.4 -9.3 131.0 0.728 0.0 HOH
 2.942
 N
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:332 A:437 129.0 0.717 T -64.4 -8.9 129.0 0.717 0.0 GOL
HOH
 9.722
2.855
 N
N
 O3
O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:332 A:437 138.0 0.767 T -62.0 -10.0 138.0 0.767 0.0 GOL
HOH
 9.075
2.500
 N
OE1
 O3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 LEU A:435 A:435 126.0 0.741 T -58.2 -22.3