Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180218690 . G A CCDS4458.1:NM_001114617.1:c.1282Cgt>Tgt_NP_001108089.1:p.428R>C Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 ARG A:331 A:430 26.0 0.116 E -80.7 126.5 26.0 0.116 0.0 HOH
 2.679
 NH1
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 ARG A:331 A:430 25.0 0.111 E -79.6 122.6 25.0 0.111 0.0 HOH
 2.933
 NH1
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 ARG A:326 A:430 24.0 0.107 E -81.2 127.2 24.0 0.107 0.0 HOH
 2.657
 NH1
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:325 A:430 25.0 0.111 E -84.3 123.6 25.0 0.111 0.0 HOH
 2.741
 NH2
 O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:325 A:430 24.0 0.107 E -80.7 128.0 24.0 0.107 0.0 HOH
 2.843
 NH1
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:325 A:430 24.0 0.107 E -81.2 126.1 24.0 0.107 0.0 HOH
 2.776
 NH1
 O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:325 A:430 26.0 0.116 E -78.8 127.0 26.0 0.116 0.0 HOH
 2.870
 NH1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 ARG A:428 A:428 15.0 0.067 E -69.6 122.6