Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180218813 . G A CCDS4458.1:NM_001114617.1:c.1159Cag>Tag_NP_001108089.1:p.387Q>* Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 GLN A:290 A:389 58.0 0.322 E -94.9 134.3 58.0 0.322 0.0 HOH
 2.581
 O
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 GLN A:290 A:389 55.0 0.306 E -92.7 132.6 55.0 0.306 0.0 HOH
 2.585
 OE1
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 GLN A:285 A:389 57.0 0.317 E -91.7 133.8 57.0 0.317 0.0 HOH
 2.481
 O
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:284 A:389 53.0 0.294 E -90.2 134.4 53.0 0.294 0.0 GOL
HOH
 9.943
2.694
 C
OE1
 O3
O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:284 A:389 60.0 0.333 E -94.1 134.4 60.0 0.333 0.0 HOH
 2.690
 O
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:284 A:389 55.0 0.306 E -90.3 135.3 55.0 0.306 0.0 GOL
HOH
 9.808
2.741
 C
OE1
 O3
O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:284 A:389 59.0 0.328 E -90.8 136.2 59.0 0.328 0.0 GOL
HOH
 9.333
2.756
 C
O
 O3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 GLN A:387 A:387 54.0 0.3 E -89.4 124.8