Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180218840 . G A CCDS4458.1:NM_001114617.1:c.1132Cgg>Tgg_NP_001108089.1:p.378R>W Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 ARG A:281 A:380 115.0 0.511 50.8 55.0 115.0 0.511 0.0 HOH
 2.901
 N
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 ARG A:281 A:380 95.0 0.422 53.9 49.1 95.0 0.422 0.0 HOH
 2.909
 CD
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 ARG A:276 A:380 107.0 0.476 50.4 53.6 107.0 0.476 0.0 HOH
 3.078
 NH2
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:275 A:380 110.0 0.489 47.6 52.3 110.0 0.489 0.0 HOH
 3.167
 NE
 O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:275 A:380 111.0 0.493 50.0 52.8 111.0 0.493 0.0 HOH
 3.161
 NE
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:275 A:380 109.0 0.484 48.8 54.1 109.0 0.484 0.0 HOH
 5.188
 O
 O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:275 A:380 111.0 0.493 50.3 55.3 111.0 0.493 0.0 HOH
 3.470
 NE
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 ARG A:378 A:378 125.0 0.556 55.9 49.0