Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180218888 . C A CCDS4458.1:NM_001114617.1:c.1084Gtc>Ttc_NP_001108089.1:p.362V>F Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 VAL A:265 A:364 0.0 0.0 H -63.5 -47.0 0.0 0.0 0.0 HOH
 4.882
 N
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 VAL A:265 A:364 0.0 0.0 H -63.2 -50.7 0.0 0.0 0.0 HOH
 5.113
 N
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 VAL A:260 A:364 0.0 0.0 H -62.9 -47.2 0.0 0.0 0.0 HOH
 4.939
 N
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 VAL A:259 A:364 0.0 0.0 H -62.1 -52.6 0.0 0.0 0.0 HOH
 4.868
 N
 O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 VAL A:259 A:364 0.0 0.0 H -63.7 -49.0 0.0 0.0 0.0 HOH
 4.923
 N
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 VAL A:259 A:364 0.0 0.0 H -64.2 -48.8 0.0 0.0 0.0 HOH
 4.936
 N
 O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 VAL A:259 A:364 0.0 0.0 H -63.6 -49.4 0.0 0.0 0.0 HOH
 4.865
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 VAL A:362 A:362 0.0 0.0 H -62.8 -49.0