Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180218921 . G A CCDS4458.1:NM_001114617.1:c.1051Cgg>Tgg_NP_001108089.1:p.351R>W Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 GLN A:254 A:353 73.0 0.406 H -50.8 -47.7 73.0 0.406 0.0 HOH
 2.862
 OE1
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 GLN A:254 A:353 81.0 0.45 H -45.6 -50.3 81.0 0.45 0.0 HOH
 2.448
 NE2
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 GLN A:249 A:353 73.0 0.406 H -50.0 -49.1 73.0 0.406 0.0 HOH
 2.824
 NE2
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:248 A:353 76.0 0.422 H -47.9 -45.3 76.0 0.422 0.0 HOH
 4.415
 NE2
 O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:248 A:353 75.0 0.417 H -52.5 -50.1 75.0 0.417 0.0 HOH
 3.041
 NE2
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:248 A:353 76.0 0.422 H -55.4 -42.9 76.0 0.422 0.0 GOL
HOH
 9.343
4.768
 NE2
OE1
 O1
O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:248 A:353 73.0 0.406 H -51.4 -47.3 73.0 0.406 0.0 HOH
 3.034
 OE1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 ARG A:351 A:351 107.0 0.476 H -49.7 -46.1