Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180219059 . G A CCDS4458.1:NM_001114617.1:c.913Cgc>Tgc_NP_001108089.1:p.305R>C Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 ARG A:208 A:307 3.0 0.013 E -141.9 155.8 3.0 0.013 0.0 HOH
 2.784
 NH1
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 ARG A:208 A:307 4.0 0.018 E -140.7 154.0 4.0 0.018 0.0 HOH
 2.882
 NH1
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 ARG A:203 A:307 4.0 0.018 E -142.8 155.3 4.0 0.018 0.0 HOH
 2.820
 NH1
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:202 A:307 4.0 0.018 E -141.4 154.0 4.0 0.018 0.0 HOH
 2.705
 NH1
 O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:202 A:307 4.0 0.018 E -142.0 154.5 4.0 0.018 0.0 HOH
 2.777
 NH1
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:202 A:307 3.0 0.013 E -143.3 153.1 3.0 0.013 0.0 HOH
 2.827
 NE
 O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:202 A:307 4.0 0.018 E -143.0 154.0 4.0 0.018 0.0 HOH
 2.842
 NH1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 ARG A:305 A:305 3.0 0.013 E -137.1 152.5