Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180219091 . C A CCDS4458.1:NM_001114617.1:c.881cGg>cTg_NP_001108089.1:p.294R>L Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 ARG A:197 A:296 126.0 0.56 S -73.2 147.4 126.0 0.56 0.0 HOH
 3.115
 NE
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 ARG A:197 A:296 125.0 0.556 S -70.8 150.3 125.0 0.556 0.0 HOH
 2.850
 NH1
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 ARG A:192 A:296 127.0 0.564 S -73.0 147.3 127.0 0.564 0.0 HOH
 3.042
 NE
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:191 A:296 126.0 0.56 S -71.8 150.1 126.0 0.56 0.0 GOL
HOH
 9.583
2.986
 NH2
NH1
 C3
O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:191 A:296 128.0 0.569 S -74.2 146.7 128.0 0.569 0.0 HOH
 3.138
 NE
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:191 A:296 125.0 0.556 S -73.1 147.3 125.0 0.556 0.0 HOH
 2.958
 NH1
 O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ARG A:191 A:296 117.0 0.52 S -74.3 147.6 117.0 0.52 0.0 GOL
HOH
 9.551
2.990
 NH2
NH1
 C3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 ARG A:294 A:294 125.0 0.556 S -72.7 148.0