Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180219130 . G A CCDS4458.1:NM_001114617.1:c.842cCc>cTc_NP_001108089.1:p.281P>L Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 PRO A:184 A:283 109.0 0.752 G -61.7 -20.3 109.0 0.752 0.0 HOH
 2.898
 O
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 PRO A:184 A:283 101.0 0.697 G -59.6 -29.0 101.0 0.697 0.0 HOH
 3.248
 O
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 PRO A:179 A:283 108.0 0.745 G -60.6 -20.4 108.0 0.745 0.0 HOH
 3.583
 CG
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 PRO A:178 A:283 109.0 0.752 G -61.1 -24.6 109.0 0.752 0.0 HOH
 3.548
 CG
 O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 PRO A:178 A:283 108.0 0.745 G -58.0 -22.8 108.0 0.745 0.0 HOH
 3.583
 CG
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 PRO A:178 A:283 110.0 0.759 G -59.6 -20.2 110.0 0.759 0.0 HOH
 3.434
 CG
 O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 PRO A:178 A:283 108.0 0.745 G -60.5 -19.5 108.0 0.745 0.0 HOH
 3.500
 CG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 PRO A:281 A:281 114.0 0.786 G -63.3 -26.1