Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180219140 . C A CCDS4458.1:NM_001114617.1:c.832Gag>Tag_NP_001108089.1:p.278E>* Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 GLU A:181 A:280 53.0 0.279 H -81.8 -37.3 53.0 0.279 0.0 HOH
 2.642
 OE2
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 GLU A:181 A:280 53.0 0.279 H -76.1 -40.1 53.0 0.279 0.0 HOH
 2.617
 OE2
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 GLU A:176 A:280 53.0 0.279 H -79.6 -36.8 53.0 0.279 0.0 HOH
 2.632
 O
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLU A:175 A:280 52.0 0.274 H -79.0 -40.8 52.0 0.274 0.0 GOL
HOH
 4.132
2.677
 OE1
OE2
 O2
O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLU A:175 A:280 54.0 0.284 H -78.4 -38.9 54.0 0.284 0.0 GOL
HOH
 4.286
2.494
 OE1
OE1
 O2
O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLU A:175 A:280 51.0 0.268 H -77.6 -40.4 51.0 0.268 0.0 GOL
HOH
 4.114
2.559
 OE1
OE2
 O2
O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLU A:175 A:280 52.0 0.274 H -79.2 -40.2 52.0 0.274 0.0 GOL
HOH
 4.240
2.614
 OE1
OE1
 O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 GLU A:278 A:278 51.0 0.268 H -72.6 -44.5