Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180219304 . C A CCDS4458.1:NM_001114617.1:c.668cGg>cTg_NP_001108089.1:p.223R>L Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 GLN A:126 A:225 14.0 0.078 H -63.8 -40.8 14.0 0.078 0.0 HOH
 2.371
 OE1
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 GLN A:126 A:225 61.0 0.339 H -70.8 -27.4 61.0 0.339 0.0 HOH
 3.637
 O
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 GLN A:121 A:225 23.0 0.128 H -64.6 -39.8 23.0 0.128 0.0 HOH
 2.358
 OE1
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:120 A:225 62.0 0.344 H -61.0 -43.5 62.0 0.344 0.0 HOH
 2.861
 O
 O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:120 A:225 67.0 0.372 H -64.3 -39.3 67.0 0.372 0.0 HOH
 2.847
 OE1
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:120 A:225 64.0 0.356 H -63.6 -40.7 64.0 0.356 0.0 HOH
 2.708
 OE1
 O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 GLN A:120 A:225 71.0 0.394 H -62.9 -41.7 71.0 0.394 0.0 HOH
 2.733
 NE2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 ARG A:223 A:223 114.0 0.507 H -60.3 -44.1