Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180219451 . G A CCDS4458.1:NM_001114617.1:c.521cCg>cTg_NP_001108089.1:p.174P>L Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 PRO A:77 A:176 86.0 0.593 T -54.9 -23.7 86.0 0.593 0.0 HOH
 2.664
 O
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 PRO A:77 A:176 92.0 0.634 T -53.4 -25.8 92.0 0.634 0.0 HOH
 2.623
 O
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 PRO A:72 A:176 119.0 0.821 T -56.6 -22.2 119.0 0.821 0.0 HOH
 2.743
 O
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 PRO A:71 A:176 85.0 0.586 T -54.3 -26.5 85.0 0.586 0.0 HOH
 2.641
 O
 O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 PRO A:71 A:176 107.0 0.738 T -53.3 -25.0 107.0 0.738 0.0 HOH
 2.703
 O
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 PRO A:71 A:176 124.0 0.855 T -53.7 -23.6 124.0 0.855 0.0 HOH
 2.741
 O
 O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 PRO A:71 A:176 88.0 0.607 T -53.9 -22.4 88.0 0.607 0.0 HOH
 2.769
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 PRO A:174 A:174 100.0 0.69 G -56.1 -37.0