Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 180219460 . G A CCDS4458.1:NM_001114617.1:c.512gCg>gTg_NP_001108089.1:p.171A>V Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1fo9 1 P27115 94.44 0.0 X-RAY
 2001-04-25 ALA A:74 A:173 90.0 0.783 -74.0 121.0 90.0 0.783 0.0 HOH
 2.789
 O
 O
1foa 1 P27115 94.44 0.0 X-RAY
 2001-05-16 ALA A:74 A:173 96.0 0.835 -78.2 108.3 96.0 0.835 0.0 HOH
 2.966
 N
 O
1fo8 1 P27115 94.44 0.0 X-RAY
 2001-04-25 ALA A:69 A:173 97.0 0.843 -72.8 121.4 97.0 0.843 0.0 HOH
 2.864
 O
 O
2am3 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ALA A:68 A:173 96.0 0.835 -77.2 112.5 96.0 0.835 0.0 HOH
 2.739
 N
 O
2am4 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ALA A:68 A:173 91.0 0.791 -75.8 121.3 91.0 0.791 0.0 HOH
 2.999
 N
 O
2am5 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ALA A:68 A:173 92.0 0.8 -76.7 116.6 92.0 0.8 0.0 HOH
 2.854
 O
 O
2apc 1 P27115 94.44 0.0 X-RAY
 2006-06-27 ALA A:68 A:173 91.0 0.791 -75.5 112.5 91.0 0.791 0.0 HOH
 2.726
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p26572-f1 1 P26572 100.0 0.0 ALA A:171 A:171 97.0 0.843 -66.3 119.7