Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41739493 . G A CCDS3937.1:NM_000436.3:c.1520gCa>gTa_NP_000427.1:p.507A>V Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 ALA A:469 A:507 54.0 0.47 E -75.3 156.0 54.0 0.47 0.0
ALA B:469 B:507 52.0 0.452 E -73.8 152.9 52.0 0.452 0.0
ALA C:469 C:507 55.0 0.478 E -85.9 150.5 NA NA NA
ALA D:469 D:507 58.0 0.504 -136.9 115.0 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 ALA A:468 A:468 53.0 0.461 E -81.9 160.1 53.0 0.461 0.0 HOH
 5.827
 N
 O
ALA B:468 B:468 53.0 0.461 E -85.2 163.1 53.0 0.461 0.0 HOH
 4.622
 N
 O
ALA C:468 C:468 51.0 0.443 E -93.4 160.3 NA NA NA
ALA D:468 D:468 51.0 0.443 E -96.7 160.9 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 ALA A:468 A:507 54.0 0.47 E -82.4 173.6 54.0 0.47 0.0 HOH
 5.116
 N
 O
ALA B:468 B:507 55.0 0.478 E -82.4 174.7 55.0 0.478 0.0
ALA C:468 C:507 56.0 0.487 E -79.5 177.2 NA NA NA
ALA D:468 D:507 57.0 0.496 E -77.9 164.0 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 ALA A:468 A:468 54.0 0.47 E -83.2 156.9 54.0 0.47 0.0 HOH
 3.384
 CA
 O
ALA B:468 B:468 55.0 0.478 E -82.4 155.5 55.0 0.478 0.0 HOH
 3.267
 CA
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 ALA A:468 A:468 55.0 0.478 E -82.5 153.5 55.0 0.478 0.0 HOH
 3.524
 CA
 O
ALA B:468 D:468 53.0 0.461 E -76.4 157.3 NA NA NA
ALA C:468 C:468 53.0 0.461 E -76.5 157.0 NA NA NA
ALA D:468 B:468 50.0 0.435 E -80.7 153.5 50.0 0.435 0.0 HOH
 3.502
 CB
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 ALA A:468 A:468 57.0 0.496 E -74.5 154.2 57.0 0.496 0.0 HOH
 3.400
 N
 O
ALA B:468 B:468 57.0 0.496 E -74.2 154.2 57.0 0.496 0.0
ALA C:468 C:468 56.0 0.487 E -75.1 154.0 NA NA NA
ALA D:468 D:468 56.0 0.487 E -75.3 153.3 NA NA NA
ALA E:468 E:468 59.0 0.513 E -77.2 140.7 NA NA NA
ALA F:468 F:468 57.0 0.496 E -77.0 141.8 NA NA NA
ALA G:468 G:468 58.0 0.504 E -76.9 140.8 NA NA NA
ALA H:468 H:468 56.0 0.487 E -76.9 140.8 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ALA A:468 A:468 54.0 0.47 E -86.0 162.4 54.0 0.47 0.0 HOH
 8.726
 N
 O
ALA B:468 B:468 37.0 0.322 E -81.8 155.1 37.0 0.322 0.0 HOH
 3.645
 CA
 O
ALA C:468 C:468 55.0 0.478 E -90.7 154.6 NA NA NA
ALA D:468 D:468 58.0 0.504 E -84.0 154.3 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ALA A:468 A:468 53.0 0.461 E -85.5 159.6 53.0 0.461 0.0 HOH
 3.788
 CB
 O
ALA B:468 B:468 41.0 0.357 E -74.0 158.4 41.0 0.357 0.0 HOH
 4.589
 CB
 O
ALA C:468 C:468 56.0 0.487 E -81.5 154.9 NA NA NA
ALA D:468 D:468 57.0 0.496 E -85.6 156.5 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ALA A:462 A:468 53.0 0.461 E -82.1 155.3 53.0 0.461 0.0 HOH
 3.540
 CA
 O
ALA B:462 B:468 55.0 0.478 E -84.0 156.8 55.0 0.478 0.0 HOH
 3.431
 CA
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ALA A:462 A:468 50.0 0.435 E -80.0 163.7 50.0 0.435 0.0 HOH
 3.631
 CB
 O
ALA B:462 B:468 52.0 0.452 E -77.9 165.9 52.0 0.452 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 ALA A:507 A:507 53.0 0.461 E -78.1 156.2