Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41749646 . G A CCDS3937.1:NM_000436.3:c.1402Cgc>Tgc_NP_000427.1:p.468R>C Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 ARG A:430 A:468 40.0 0.178 E -145.1 144.2 40.0 0.178 0.0 HOH
 6.895
 N
 O
ARG B:430 B:468 38.0 0.169 E -160.2 147.3 38.0 0.169 0.0
ARG C:430 C:468 37.0 0.164 E -149.2 145.3 NA NA NA
ARG D:430 D:468 36.0 0.16 E -162.0 142.3 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 ARG A:429 A:429 50.0 0.222 E -153.3 141.2 50.0 0.222 0.0 HOH
 2.951
 NH2
 O
ARG B:429 B:429 38.0 0.169 E -155.5 141.0 38.0 0.169 0.0 HOH
 3.247
 NH1
 O
ARG C:429 C:429 41.0 0.182 E -155.1 141.4 NA NA NA
ARG D:429 D:429 57.0 0.253 E -154.5 141.2 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 ARG A:429 A:468 41.0 0.182 E -154.7 142.2 41.0 0.182 0.0 HOH
 3.879
 NH2
 O
ARG B:429 B:468 45.0 0.2 E -151.3 143.9 45.0 0.2 0.0 EMT
HOH
 9.193
6.254
 O
O
 C1
O
ARG C:429 C:468 42.0 0.187 E -142.3 146.2 NA NA NA
ARG D:429 D:468 43.0 0.191 E -152.9 141.3 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 ARG A:429 A:429 40.0 0.178 E -155.4 144.5 40.0 0.178 0.0 K
HOH
 7.649
3.056
 N
NH2
 K
O
ARG B:429 B:429 53.0 0.236 E -151.6 141.9 53.0 0.236 0.0 K
HOH
 7.537
2.982
 N
NH2
 K
O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 ARG A:429 A:429 55.0 0.244 E -150.8 145.4 55.0 0.244 0.0 HOH
 3.012
 NH1
 O
ARG B:429 D:429 41.0 0.182 E -149.7 142.9 NA NA NA
ARG C:429 C:429 46.0 0.204 E -151.3 142.3 NA NA NA
ARG D:429 B:429 40.0 0.178 E -152.0 144.7 40.0 0.178 0.0 HOH
 3.208
 NH2
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 ARG A:429 A:429 39.0 0.173 E -153.1 143.5 39.0 0.173 0.0 HOH
 6.370
 NH2
 O
ARG B:429 B:429 40.0 0.178 E -154.6 142.3 40.0 0.178 0.0 HOH
 4.288
 NH2
 O
ARG C:429 C:429 41.0 0.182 E -155.3 142.1 NA NA NA
ARG D:429 D:429 41.0 0.182 E -154.7 141.3 NA NA NA
ARG E:429 E:429 49.0 0.218 E -143.1 150.1 NA NA NA
ARG F:429 F:429 48.0 0.213 E -142.2 150.0 NA NA NA
ARG G:429 G:429 49.0 0.218 E -142.6 149.5 NA NA NA
ARG H:429 H:429 48.0 0.213 E -141.9 150.2 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ARG A:429 A:429 43.0 0.191 E -154.4 141.4 43.0 0.191 0.0 HOH
 3.772
 NH1
 O
ARG B:429 B:429 41.0 0.182 E -149.1 149.3 41.0 0.182 0.0 HOH
 7.689
 N
 O
ARG C:429 C:429 43.0 0.191 E -149.2 144.1 NA NA NA
ARG D:429 D:429 43.0 0.191 E -149.7 143.8 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 ARG A:429 A:429 49.0 0.218 E -154.6 148.7 49.0 0.218 0.0 HOH
 3.213
 NH1
 O
ARG B:429 B:429 39.0 0.173 E -167.8 146.2 39.0 0.173 0.0 HOH
 3.391
 NH2
 O
ARG C:429 C:429 44.0 0.196 E -155.1 145.2 NA NA NA
ARG D:429 D:429 46.0 0.204 E -170.3 137.1 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ARG A:423 A:429 29.0 0.129 E -157.1 144.3 29.0 0.129 0.0 K
HOH
 7.654
3.075
 N
NH1
 K
O
ARG B:423 B:429 24.0 0.107 E -152.6 145.5 24.0 0.107 0.0 K
HOH
 7.604
2.990
 N
NH1
 K
O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 ARG A:423 A:429 28.0 0.124 E -153.2 144.2 28.0 0.124 0.0 K
HOH
 7.992
6.975
 N
N
 K
O
ARG B:423 B:429 25.0 0.111 E -151.2 149.3 25.0 0.111 0.0 K
HOH
 7.777
3.983
 N
NH1
 K
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 ARG A:468 A:468 44.0 0.196 E -147.7 145.1