Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41749679 . T A CCDS3937.1:NM_000436.3:c.1369Aca>Tca_NP_000427.1:p.457T>S Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 THR A:419 A:457 113.0 0.807 S -107.0 -13.0 113.0 0.807 0.0 HOH
 4.113
 C
 O
THR B:419 B:457 113.0 0.807 -118.3 -10.5 113.0 0.807 0.0 HOH
 4.365
 C
 O
THR C:419 C:457 116.0 0.829 S -108.2 -9.3 NA NA NA
THR D:419 D:457 112.0 0.8 S -106.3 -19.1 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 THR A:418 A:418 105.0 0.75 S -92.9 -48.8 105.0 0.75 0.0 HOH
 3.862
 OG1
 O
THR B:418 B:418 106.0 0.757 S -93.1 -49.0 106.0 0.757 0.0 HOH
 2.972
 O
 O
THR C:418 C:418 107.0 0.764 S -93.6 -49.4 NA NA NA
THR D:418 D:418 107.0 0.764 S -93.7 -50.3 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 THR A:418 A:457 103.0 0.736 S -53.4 -28.9 103.0 0.736 0.0
THR B:418 NA:NA DO NA DO DO DO NA NA NA
THR C:418 NA:NA DO NA DO DO DO NA NA NA
THR D:418 D:457 96.0 0.686 -93.5 -35.1 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 THR A:418 A:418 114.0 0.814 S -106.9 -12.8 114.0 0.814 0.0 HOH
 2.886
 OG1
 O
THR B:418 B:418 113.0 0.807 S -107.0 -17.2 113.0 0.807 0.0 HOH
 3.476
 O
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 THR A:418 A:418 115.0 0.821 S -96.6 -15.2 115.0 0.821 0.0 HOH
 2.953
 O
 O
THR B:418 D:418 105.0 0.75 S -105.7 -15.1 NA NA NA
THR C:418 C:418 111.0 0.793 -105.3 -11.6 NA NA NA
THR D:418 B:418 111.0 0.793 S -104.2 -17.9 111.0 0.793 0.0 HOH
 2.587
 O
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 THR A:418 A:418 115.0 0.821 S -102.4 -21.0 115.0 0.821 0.0 HOH
 4.395
 N
 O
THR B:418 B:418 115.0 0.821 S -100.6 -23.8 115.0 0.821 0.0 HOH
 5.913
 N
 O
THR C:418 C:418 112.0 0.8 S -100.7 -23.6 NA NA NA
THR D:418 D:418 115.0 0.821 S -100.8 -23.8 NA NA NA
THR E:418 E:418 115.0 0.821 S -90.8 -27.0 NA NA NA
THR F:418 F:418 113.0 0.807 S -91.2 -25.5 NA NA NA
THR G:418 G:418 115.0 0.821 S -91.4 -26.1 NA NA NA
THR H:418 H:418 115.0 0.821 S -90.9 -26.2 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 THR A:418 A:418 110.0 0.786 S -101.3 -11.2 110.0 0.786 0.0 HOH
 5.102
 OG1
 O
THR B:418 B:418 113.0 0.807 S -97.5 -13.2 113.0 0.807 0.0 HOH
 5.267
 OG1
 O
THR C:418 C:418 110.0 0.786 S -99.1 -29.1 NA NA NA
THR D:418 D:418 117.0 0.836 S -96.1 -9.9 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 THR A:418 A:418 111.0 0.793 S -106.6 -11.0 111.0 0.793 0.0 HOH
 5.013
 OG1
 O
THR B:418 B:418 115.0 0.821 S -101.1 -14.4 115.0 0.821 0.0 HOH
 5.645
 N
 O
THR C:418 C:418 117.0 0.836 S -99.1 -18.0 NA NA NA
THR D:418 D:418 117.0 0.836 S -101.7 -36.4 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 THR A:412 A:418 102.0 0.729 S -113.7 -0.3 98.0 0.7 0.029 A:Q29551:0.029
 HOH
 2.821
 O
 O
THR B:412 B:418 103.0 0.736 -111.2 -2.6 103.0 0.736 0.0 HOH
 4.057
 C
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 THR A:412 A:418 104.0 0.743 S -117.9 -16.1 104.0 0.743 0.0 HOH
 7.863
 C
 O
THR B:412 B:418 100.0 0.714 S -120.4 -12.3 100.0 0.714 0.0 HOH
 2.782
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 THR A:457 A:457 111.0 0.793 S -98.0 -17.2