Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr5 41749688 . C A CCDS3937.1:NM_000436.3:c.1360Gag>Tag_NP_000427.1:p.454E>* Homo sapiens 3-oxoacid CoA-transferase 1 (OXCT1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3dlx 1 P55809 100.0 0.0 X-RAY
 2008-08-12 GLU A:416 A:454 116.0 0.611 S -74.6 -44.1 116.0 0.611 0.0 HOH
 6.537
 O
 O
GLU B:416 B:454 106.0 0.558 S -65.7 -51.3 106.0 0.558 0.0 HOH
 3.754
 N
 O
GLU C:416 C:454 61.0 NA S -63.1 -48.0 NA NA NA
GLU D:416 D:454 59.0 NA S -63.6 -43.4 NA NA NA
1m3e 1 Q29551 92.07 0.0 X-RAY
 2003-01-07 GLU A:415 A:415 83.0 0.437 S -60.3 -52.5 83.0 0.437 0.0 HOH
 6.489
 OE2
 O
GLU B:415 B:415 81.0 0.426 S -60.4 -52.5 81.0 0.426 0.0 HOH
 2.555
 OE2
 O
GLU C:415 C:415 83.0 0.437 S -60.0 -52.6 NA NA NA
GLU D:415 D:415 83.0 0.437 S -60.4 -52.9 NA NA NA
1o9l 1 Q29551 92.07 0.0 X-RAY
 2002-12-23 GLU A:415 A:454 113.0 0.595 S -78.8 -43.6 113.0 0.595 0.0
GLU B:415 NA:NA DO NA DO DO DO NA NA NA
GLU C:415 NA:NA DO NA DO DO DO NA NA NA
GLU D:415 D:454 113.0 0.595 S -78.5 -42.4 NA NA NA
1ooy 1 Q29551 92.07 0.0 X-RAY
 2004-04-27 GLU A:415 A:415 88.0 0.463 S -60.6 -45.6 88.0 0.463 0.0 HOH
 2.454
 OE2
 O
GLU B:415 B:415 80.0 0.421 S -59.9 -46.6 80.0 0.421 0.0 HOH
 2.522
 OE1
 O
3k6m 1 Q29551 92.07 0.0 X-RAY
 2010-07-07 GLU A:415 A:415 127.0 0.668 S -63.7 -41.5 127.0 0.668 0.0 HOH
 2.831
 OE2
 O
GLU B:415 D:415 87.0 0.458 S -56.7 -45.6 NA NA NA
GLU C:415 C:415 85.0 0.447 S -59.5 -46.9 NA NA NA
GLU D:415 B:415 98.0 0.516 S -59.7 -47.3 98.0 0.516 0.0 HOH
 2.613
 O
 O
3oxo 1 Q29551 92.07 0.0 X-RAY
 2010-11-10 GLU A:415 A:415 93.0 0.489 S -60.7 -52.1 93.0 0.489 0.0 HOH
 5.343
 O
 O
GLU B:415 B:415 93.0 0.489 S -60.8 -53.1 93.0 0.489 0.0 HOH
 5.058
 O
 O
GLU C:415 C:415 93.0 0.489 S -61.0 -51.5 NA NA NA
GLU D:415 D:415 92.0 0.484 S -61.9 -53.0 NA NA NA
GLU E:415 E:415 94.0 0.495 S -61.0 -47.5 NA NA NA
GLU F:415 F:415 95.0 0.5 S -59.9 -48.5 NA NA NA
GLU G:415 G:415 94.0 0.495 S -60.7 -48.5 NA NA NA
GLU H:415 H:415 95.0 0.5 S -60.4 -48.8 NA NA NA
2nrc 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 GLU A:415 A:415 88.0 0.463 S -59.8 -53.8 88.0 0.463 0.0 HOH
 6.117
 O
 O
GLU B:415 B:415 86.0 0.453 S -60.5 -48.4 86.0 0.453 0.0 HOH
 2.709
 OE2
 O
GLU C:415 C:415 115.0 0.605 S -59.1 -45.3 NA NA NA
GLU D:415 D:415 80.0 0.421 S -59.6 -55.9 NA NA NA
2nrb 1 Q29551 91.86 0.0 X-RAY
 2007-09-18 GLU A:415 A:415 83.0 0.437 S -54.9 -62.1 83.0 0.437 0.0 HOH
 3.859
 O
 O
GLU B:415 B:415 86.0 0.453 S -63.1 -36.1 86.0 0.453 0.0 HOH
 3.015
 OE1
 O
GLU C:415 C:415 83.0 0.437 S -59.1 -48.5 NA NA NA
GLU D:415 D:415 80.0 0.421 S -49.4 -62.0 NA NA NA
1ooz 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 GLU A:409 A:415 88.0 0.463 S -57.0 -52.7 60.0 0.316 0.147 A:Q29551:0.147
 HOH
 2.887
 OE2
 O
GLU B:409 B:415 89.0 0.468 S -58.7 -52.5 89.0 0.468 0.0 HOH
 2.458
 OE2
 O
1ope 1 Q29551 91.86 0.0 X-RAY
 2004-04-27 GLU A:409 A:415 94.0 0.495 S -79.9 -52.6 94.0 0.495 0.0 HOH
 6.648
 OE2
 O
GLU B:409 B:415 94.0 0.495 S -80.1 -49.8 94.0 0.495 0.0 HOH
 6.496
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55809-f1 1 P55809 100.0 0.0 GLU A:454 A:454 82.0 0.432 S -62.0 -44.9